Life Sciences Mass Spectrometry eNewsletter
Critical Mass Issue 15
Sep 2005
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 Announcing the Finnigan LXQ Linear Ion Trap Mass Spectrometer  
Announcing the Finnigan LXQ, a new cost-effective linear ion trap mass spectrometer that delivers high performance for rapid, reliable analysis supporting high-throughput solutions for today's fast paced analytical laboratory. The LXQ provides superior speed and sensitivity over 3D ion traps, combined with the ruggedness that Finnigan ion traps have delivered for years.
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 Tip of the Month: Verify your Ion Guage Reading  
The ion gauge reading for a Finnigan LTQ ion trap mass spectrometer is typically ~0.8 E-5 torr at 275°C heated capillary temperature. If the reading that you observe is higher, e.g. 2.0 E-5 torr, then your Helium tank is either closed or empty.
 

 Webinar: Identification of Biotransformations using Ion Traps  
Speaker: Gargi Choudhary, Ph.D., Senior Applications Scientist
Agenda: This webinar will show that Automated Data Dependent Constant Neutral Loss (DDCNL) Scan Function is a powerful tool that increases the selectivity for identification of modifications exhibiting a characteristic mass shift. This technique can be used for the analysis of post translational modifications, drug biotransformations, and can also be applied to the analysis of other classes of compound transformations, such as degradation or by-product analyses. It simplifies the analysis of complex mixtures in biological matrices, and enables rapid characterization of low abundance species.
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 Quantum Waves: Preclinical Bioanalysis with Animal Models (Contributor: Pete Kissinger, Ph.D.)  
"Thermo instruments have helped our company make major advances in the way rodents are utilized for early in vivo screening. We have been able to dramatically reduce the number of animals required to acquire quality data by obtaining complete PK curves from individual animals and by simultaneously, in parallel, acquiring PD data. Furthermore, the quality of the data is enhanced by automation. Dosing, collection of samples (blood, urine, feces, microdialysates in central or peripheral tissue) and acquisition of PD data are all carried out without human intervention. Why is this important? Because human interaction with rodents stimulates animal stress, which alters the data we need to obtain. How is this advance possible? Because the Thermo LCQ and TSQ Quantum series of instruments enable the analysis of smaller volume samples via lower limits of quantitation, along with very flexible software for metabolite identification. We especially like the MSn feature of ion traps and the unique H-SRM (Highly Selective Reaction Monitoring) capability of the Quantum. We now have over five years of experience proving these points in our contract research laboratories, which serve drug discovery companies as well as big pharma. Not only that, but many of our client companies have done so as well at their own R&D sites in the USA and Europe."
-- Pete Kissinger, Ph.D., Chairman and CEO, Bioanalytical Systems, Inc; Professor of Chemistry, Purdue University (These are the personal views of Prof. Kissinger and do not represent endorsement by Purdue University.)
Download Full Article on Preclinical Bioanalysis with Animal Models (PDF 2134 kB) 

 Contribute to Critical Mass  
Critical Mass is now accepting contributions from subscribers. If selected for publication, contributors will receive a Thermo-branded momento as a token of our appreciation. You are welcome to send contributions in all areas of Mass Spectrometry. Critical Mass will accept a wide range of contributions including but not limited to Your Research Interests in Mass Spectrometry or using Mass Spectrometry, Tips, New Applications, Interesting Stories on using Thermo's Mass Spectrometers, etc. Please click on the link provided below to read the Terms and Conditions for making contributions.
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 Proteomics Seminars - North America  
Announcing a FREE One-Day Seminar featuring the latest research on Top-Down Proteomics, Quantitative Proteomics, Biomarker Discovery, and PTM Analysis using the new 2D ion trap, the Finnigan LXQ and the breakthrough hybrid mass spectrometer, the LTQ Orbitrap. Specific topics may include: Benefits of high mass accuracy in biomarker discovery, Top-down sequencing using FTMS, Eliminating low mass cut-off using PQD...
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 Proteomics Seminars - Europe  
Announcing a FREE one-day seminars feature presentations by customers as well as Thermo application specialists who will share their experiences and highlight the latest applications and techniques for a range of topics relating to Proteomics and Biomarker Discovery. Specific topics include Biomarkers of myocardial infarction, Quantification strategies using ion trap technology, Determination of hetero-elements in proteins using high-resolution ICP-MS...
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 FAIMS: A Tool for Accelerating LC/MS Method Development  
LC-MS/MS is a highly selective technique for bioanalysis, but for challenging assays, more selectivity may be beneficial. Background interferences, co-eluting isobaric ions, long analytical run times, and poor ion fragmentation characteristics lead researchers back to the drawing board. Redeveloping and validating assays is time consuming and costly, with no guarantee of success. FAIMS is a unique problem solving tool for LC-MS method development enabling...
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 Trap Talk: Dynamic Range of Accurate Mass in FTMS  
The dynamic range over which accurate measurements of mass can be made is a key analytical figure-of-merit. With accurate-mass analyzers coupled to LC devices, it is important to determine the range of intensities over which accurate masses can be determined for transient signals. For all analyzers, mass accuracy is limited statistically by too few ions, or by peak position shifts due to too many ions. This work investigates extension of the dynamic range over which accurate masses can be determined (dynamic range of mass accuracy) for on-line experiments using a novel FTMS mass spectrometer (LTQ Orbitrap).
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